Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 KRT8P45-201ENST00000414328 1447 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 MCCD1P1-208ENST00000445732 328 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 LINC01238-205ENST00000567549 1107 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 WWOX-216ENST00000569818 525 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 AC008622.2-201ENST00000617006 1229 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AK4P3-201ENST00000418260 669 ntBASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP1Q96SZ6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 AL023284.2-201ENST00000405850 579 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 AC104076.2-201ENST00000448912 469 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 DUX4L26-201ENST00000489078 1255 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 MIR4674-201ENST00000582457 87 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 AC006011.2-201ENST00000621313 1158 ntBASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP1Q96SZ6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 RNF152P1-201ENST00000397754 604 ntBASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms