Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 TUBB8P6-201ENST00000436895 1288 ntBASIC17.24■□□□□ 0.35
SNX18Q96RF0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX18Q96RF0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX18Q96RF0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 AC106820.2-201ENST00000563775 3264 ntBASIC17.23■□□□□ 0.35
SNX18Q96RF0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 UNC93B5-201ENST00000530315 699 ntBASIC17.23■□□□□ 0.35
SNX18Q96RF0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 SOX15-203ENST00000570788 1093 ntBASIC17.23■□□□□ 0.35
SNX18Q96RF0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNX18Q96RF0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX18Q96RF0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AL161938.1-201ENST00000569833 2180 ntBASIC17.22■□□□□ 0.35
SNX18Q96RF0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AC068880.1-201ENST00000507289 2297 ntBASIC17.22■□□□□ 0.35
SNX18Q96RF0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AP003097.1-201ENST00000530657 1135 ntBASIC17.22■□□□□ 0.35
SNX18Q96RF0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SNX18Q96RF0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX18Q96RF0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms