Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 FAM87A-204ENST00000613235 858 ntBASIC19.54■□□□□ 0.72
RPRD1AQ96P16 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPRD1AQ96P16 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 SLC25A3P1-201ENST00000443844 931 ntBASIC19.53■□□□□ 0.72
RPRD1AQ96P16 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 AC010653.2-201ENST00000623505 997 ntBASIC19.53■□□□□ 0.72
RPRD1AQ96P16 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.53■□□□□ 0.72
RPRD1AQ96P16 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPRD1AQ96P16 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 AP003041.3-201ENST00000527151 707 ntBASIC19.52■□□□□ 0.72
RPRD1AQ96P16 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RPRD1AQ96P16 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.52■□□□□ 0.72
RPRD1AQ96P16 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 AC113347.1-201ENST00000413321 391 ntBASIC19.51■□□□□ 0.71
RPRD1AQ96P16 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPRD1AQ96P16 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 HMGA1P5-201ENST00000412453 271 ntBASIC19.5■□□□□ 0.71
RPRD1AQ96P16 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms