Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AL359075.1-203ENST00000462729 1002 ntBASIC15.42■□□□□ 0.06
ZNF48Q96MX3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AC007952.6-201ENST00000573168 2673 ntBASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AC003957.1-201ENST00000625108 2673 ntBASIC15.42■□□□□ 0.06
ZNF48Q96MX3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF48Q96MX3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 KRT18P38-201ENST00000449496 1282 ntBASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC140113.3-201ENST00000605663 199 ntBASIC15.41■□□□□ 0.06
ZNF48Q96MX3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AL031432.5-201ENST00000641059 760 ntBASIC15.41■□□□□ 0.06
ZNF48Q96MX3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF48Q96MX3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.4■□□□□ 0.06
ZNF48Q96MX3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 HOMER2P1-201ENST00000455653 964 ntBASIC15.4■□□□□ 0.06
ZNF48Q96MX3 FAM86EP-206ENST00000510506 987 ntBASIC15.4■□□□□ 0.06
ZNF48Q96MX3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.4■□□□□ 0.06
ZNF48Q96MX3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 AP000550.4-202ENST00000639755 178 ntBASIC15.4■□□□□ 0.06
ZNF48Q96MX3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms