Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 FAM210CP-201ENST00000445714 574 ntBASIC25.35■■□□□ 1.65
CFAP53Q96M91 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP53Q96M91 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP53Q96M91 AC092865.7-201ENST00000641832 219 ntBASIC25.35■■□□□ 1.65
CFAP53Q96M91 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP53Q96M91 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP53Q96M91 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
CFAP53Q96M91 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 MIR4674-201ENST00000582457 87 ntBASIC25.34■■□□□ 1.65
CFAP53Q96M91 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP53Q96M91 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CFAP53Q96M91 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 KRT18P57-201ENST00000443599 1254 ntBASIC25.33■■□□□ 1.65
CFAP53Q96M91 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 AL161938.1-201ENST00000569833 2180 ntBASIC25.33■■□□□ 1.65
CFAP53Q96M91 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 AC073508.3-201ENST00000619697 1419 ntBASIC25.33■■□□□ 1.65
CFAP53Q96M91 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.33■■□□□ 1.65
CFAP53Q96M91 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP53Q96M91 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CFAP53Q96M91 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.33■■□□□ 1.64
CFAP53Q96M91 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 AL023284.2-201ENST00000405850 579 ntBASIC25.32■■□□□ 1.64
CFAP53Q96M91 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.32■■□□□ 1.64
CFAP53Q96M91 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.32■■□□□ 1.64
CFAP53Q96M91 GPAT2P1-201ENST00000444924 1672 ntBASIC25.32■■□□□ 1.64
CFAP53Q96M91 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP53Q96M91 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP53Q96M91 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 RN7SL850P-201ENST00000579959 291 ntBASIC25.31■■□□□ 1.64
CFAP53Q96M91 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
CFAP53Q96M91 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 AL512353.2-201ENST00000448759 1962 ntBASIC25.31■■□□□ 1.64
CFAP53Q96M91 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP53Q96M91 KRT8P45-201ENST00000414328 1447 ntBASIC25.3■■□□□ 1.64
CFAP53Q96M91 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CFAP53Q96M91 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP53Q96M91 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CFAP53Q96M91 TMPOP1-202ENST00000424642 1267 ntBASIC25.3■■□□□ 1.64
CFAP53Q96M91 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.3■■□□□ 1.64
CFAP53Q96M91 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
CFAP53Q96M91 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP53Q96M91 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms