Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 KSR1P1-201ENST00000446298 240 ntBASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 AC006011.2-201ENST00000621313 1158 ntBASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 KRT16P1-201ENST00000399124 1418 ntBASIC20.87■□□□□ 0.93
RPGRIP1Q96KN7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRIP1Q96KN7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 CROCCP3-202ENST00000420820 1947 ntBASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 NIFKP9-201ENST00000419265 221 ntBASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms