Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC126763.1-201ENST00000552015 2118 ntBASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 AC026271.2-201ENST00000428091 497 ntBASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP6Q96FZ7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP6Q96FZ7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 AC010536.3-201ENST00000620306 533 ntBASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP6Q96FZ7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 GNAS-203ENST00000306120 1878 ntBASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 AC083906.6-201ENST00000641366 219 ntBASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 AC018553.1-201ENST00000616682 1458 ntBASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 SDHAP1-207ENST00000440850 2000 ntBASIC19.07■□□□□ 0.64
CHMP6Q96FZ7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms