Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 AL050303.2-201ENST00000619798 666 ntBASIC18.04■□□□□ 0.48
LRRC58Q96CX6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 AC067852.2-201ENST00000590513 2313 ntBASIC18.04■□□□□ 0.48
LRRC58Q96CX6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC58Q96CX6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 DUSP5P2-201ENST00000426873 1033 ntBASIC18.03■□□□□ 0.48
LRRC58Q96CX6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
LRRC58Q96CX6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC58Q96CX6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.02■□□□□ 0.48
LRRC58Q96CX6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
LRRC58Q96CX6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.02■□□□□ 0.47
LRRC58Q96CX6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC58Q96CX6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.01■□□□□ 0.47
LRRC58Q96CX6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC58Q96CX6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms