Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APH1AQ96BI3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
APH1AQ96BI3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 IRX1P1-201ENST00000438849 1838 ntBASIC16.8■□□□□ 0.28
APH1AQ96BI3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ECEL1P3-201ENST00000427961 737 ntBASIC16.8■□□□□ 0.28
APH1AQ96BI3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.8■□□□□ 0.28
APH1AQ96BI3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 AC097493.4-201ENST00000641197 219 ntBASIC16.8■□□□□ 0.28
APH1AQ96BI3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.8■□□□□ 0.28
APH1AQ96BI3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APH1AQ96BI3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.79■□□□□ 0.28
APH1AQ96BI3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 FP475955.4-201ENST00000623131 1990 ntBASIC16.79■□□□□ 0.28
APH1AQ96BI3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APH1AQ96BI3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APH1AQ96BI3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.78■□□□□ 0.28
APH1AQ96BI3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APH1AQ96BI3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
APH1AQ96BI3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.77■□□□□ 0.28
APH1AQ96BI3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APH1AQ96BI3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.77■□□□□ 0.28
APH1AQ96BI3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
APH1AQ96BI3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms