Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.03■□□□□ 0.32
PTP4A1Q93096 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTP4A1Q93096 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTP4A1Q93096 AC020763.4-201ENST00000623414 4170 ntBASIC17.03■□□□□ 0.32
PTP4A1Q93096 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.32
PTP4A1Q93096 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.02■□□□□ 0.32
PTP4A1Q93096 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 AC026366.1-201ENST00000488803 879 ntBASIC17.02■□□□□ 0.32
PTP4A1Q93096 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 CD99P1-205ENST00000527459 561 ntBASIC17.02■□□□□ 0.32
PTP4A1Q93096 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.02■□□□□ 0.32
PTP4A1Q93096 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTP4A1Q93096 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.02■□□□□ 0.31
PTP4A1Q93096 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.02■□□□□ 0.31
PTP4A1Q93096 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTP4A1Q93096 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 KRT17P3-201ENST00000420566 1262 ntBASIC17.01■□□□□ 0.31
PTP4A1Q93096 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 POM121L13P-201ENST00000422362 380 ntBASIC17.01■□□□□ 0.31
PTP4A1Q93096 TSPY21P-201ENST00000433481 731 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms