Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP3S1Q92572 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
AP3S1Q92572 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3S1Q92572 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3S1Q92572 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AP3S1Q92572 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP3S1Q92572 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S1Q92572 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S1Q92572 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
AP3S1Q92572 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 FEM1AP3-201ENST00000403722 1741 ntBASIC16.71■□□□□ 0.27
AP3S1Q92572 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3S1Q92572 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S1Q92572 AP001330.3-201ENST00000520123 633 ntBASIC16.71■□□□□ 0.27
AP3S1Q92572 AC126763.1-201ENST00000552015 2118 ntBASIC16.71■□□□□ 0.27
AP3S1Q92572 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S1Q92572 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.71■□□□□ 0.27
AP3S1Q92572 AL591742.1-201ENST00000604433 565 ntBASIC16.71■□□□□ 0.27
AP3S1Q92572 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S1Q92572 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S1Q92572 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.71■□□□□ 0.26
AP3S1Q92572 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
AP3S1Q92572 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP3S1Q92572 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S1Q92572 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 AC116351.2-201ENST00000606540 1585 ntBASIC16.7■□□□□ 0.26
AP3S1Q92572 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3S1Q92572 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S1Q92572 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S1Q92572 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP3S1Q92572 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
AP3S1Q92572 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S1Q92572 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S1Q92572 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S1Q92572 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP3S1Q92572 AC134043.2-201ENST00000624206 2238 ntBASIC16.69■□□□□ 0.26
AP3S1Q92572 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 YBX1P1-201ENST00000445822 960 ntBASIC16.69■□□□□ 0.26
AP3S1Q92572 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.69■□□□□ 0.26
AP3S1Q92572 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms