Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH19Q8TAB3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH19Q8TAB3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 AC113410.3-201ENST00000623366 203 ntBASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH19Q8TAB3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH19Q8TAB3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 FSCN1P1-201ENST00000568912 1481 ntBASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 FAM207BP-201ENST00000447172 505 ntBASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 CKBP1-201ENST00000565489 1086 ntBASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 AP001412.1-201ENST00000608405 714 ntBASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 Z98044.1-201ENST00000632503 1764 ntBASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH19Q8TAB3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 AC116562.2-201ENST00000507042 360 ntBASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 AC073912.3-201ENST00000624414 853 ntBASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH19Q8TAB3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms