Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PJA1Q8NG27 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PJA1Q8NG27 SMG8-203ENST00000578922 2178 ntBASIC19.46■□□□□ 0.71
PJA1Q8NG27 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
PJA1Q8NG27 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 AP001271.2-201ENST00000624018 1556 ntBASIC19.45■□□□□ 0.7
PJA1Q8NG27 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 AC092597.1-201ENST00000487352 616 ntBASIC19.45■□□□□ 0.7
PJA1Q8NG27 AC034232.1-201ENST00000506026 1064 ntBASIC19.45■□□□□ 0.7
PJA1Q8NG27 MIR4674-201ENST00000582457 87 ntBASIC19.45■□□□□ 0.7
PJA1Q8NG27 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 AC023511.2-201ENST00000618803 211 ntBASIC19.45■□□□□ 0.7
PJA1Q8NG27 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PJA1Q8NG27 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PJA1Q8NG27 AC016734.2-201ENST00000624325 1377 ntBASIC19.44■□□□□ 0.7
PJA1Q8NG27 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 AFG3L1P-217ENST00000557444 2447 ntBASIC19.44■□□□□ 0.7
PJA1Q8NG27 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.44■□□□□ 0.7
PJA1Q8NG27 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PJA1Q8NG27 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PJA1Q8NG27 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.43■□□□□ 0.7
PJA1Q8NG27 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PJA1Q8NG27 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PJA1Q8NG27 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PJA1Q8NG27 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 BX119927.1-201ENST00000636596 1552 ntBASIC19.42■□□□□ 0.7
PJA1Q8NG27 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PJA1Q8NG27 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 AP002383.4-201ENST00000442518 975 ntBASIC19.42■□□□□ 0.7
PJA1Q8NG27 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PJA1Q8NG27 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 AC006538.3-201ENST00000612495 578 ntBASIC19.42■□□□□ 0.7
PJA1Q8NG27 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PJA1Q8NG27 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.42■□□□□ 0.7
PJA1Q8NG27 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms