Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 Z83836.1-201ENST00000624605 1642 ntBASIC20.93■□□□□ 0.94
KLHDC9Q8NEP7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 AC106795.1-205ENST00000512851 1056 ntBASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHDC9Q8NEP7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 KRT18P23-201ENST00000435622 1283 ntBASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 HOXB1-202ENST00000577092 1414 ntBASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 AC005332.3-201ENST00000589904 676 ntBASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 AC010240.3-201ENST00000607688 395 ntBASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC9Q8NEP7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 AL390719.2-201ENST00000606993 987 ntBASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 AC092667.1-201ENST00000434301 2586 ntBASIC20.9■□□□□ 0.94
KLHDC9Q8NEP7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC9Q8NEP7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 AP002469.2-201ENST00000531724 424 ntBASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 AC090616.6-201ENST00000582640 721 ntBASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 SLC25A6P4-201ENST00000586535 553 ntBASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC9Q8NEP7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 AC008556.1-201ENST00000610908 2040 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 AL512353.2-201ENST00000448759 1962 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms