Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 KRT18P23-201ENST00000435622 1283 ntBASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.92■□□□□ 0.94
PCSK9Q8NBP7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 TOB2P1-201ENST00000469761 992 ntBASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 AL160237.2-201ENST00000556165 472 ntBASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 AC090616.6-201ENST00000582640 721 ntBASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 AL031008.1-201ENST00000619963 541 ntBASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCSK9Q8NBP7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 HOXB1-202ENST00000577092 1414 ntBASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 AP000347.1-202ENST00000435868 847 ntBASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 AC009078.2-202ENST00000463353 338 ntBASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 AC104390.1-201ENST00000555663 520 ntBASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCSK9Q8NBP7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
PCSK9Q8NBP7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 TCF3P1-201ENST00000423021 1937 ntBASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 KRT18P31-201ENST00000506277 1292 ntBASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 FOSL1P1-201ENST00000511041 816 ntBASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 AC104692.2-201ENST00000603054 253 ntBASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 AC010240.3-201ENST00000607688 395 ntBASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCSK9Q8NBP7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms