Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 TSPY17P-201ENST00000450329 467 ntBASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 ECEL1P2-202ENST00000465689 757 ntBASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 AL353719.1-201ENST00000566847 864 ntBASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 AC008622.2-201ENST00000617006 1229 ntBASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RASGEF1AQ8N9B8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 KRT8P3-201ENST00000519669 1449 ntBASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 AC007663.1-201ENST00000438948 1240 ntBASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RASGEF1AQ8N9B8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 AIRN-201ENST00000601203 4374 ntBASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 AC128688.1-201ENST00000487626 519 ntBASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 LINC01023-201ENST00000606054 436 ntBASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 KRT18P22-201ENST00000402024 1347 ntBASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RASGEF1AQ8N9B8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 AP003041.3-201ENST00000527151 707 ntBASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 FAM87A-204ENST00000613235 858 ntBASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1AQ8N9B8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
RASGEF1AQ8N9B8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.64■□□□□ 0.58
RASGEF1AQ8N9B8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms