Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 GCSHP5-201ENST00000443090 522 ntBASIC15□□□□□ -0.01
TTC9CQ8N5M4 AC098590.1-201ENST00000468126 897 ntBASIC15□□□□□ -0.01
TTC9CQ8N5M4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 AC004951.3-201ENST00000418645 1148 ntBASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 PRSS44-201ENST00000515154 1146 ntBASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TTC9CQ8N5M4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 RCC2P6-201ENST00000526625 1557 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 AC006333.2-201ENST00000607957 2099 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 ABHD17AP1-201ENST00000358206 933 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 AL158047.1-201ENST00000445918 881 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 AP001412.1-201ENST00000608405 714 ntBASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TTC9CQ8N5M4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms