Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 KRT18P57-201ENST00000443599 1254 ntBASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 KRT18P21-201ENST00000515767 1272 ntBASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ARHGEF39Q8N4T4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARHGEF39Q8N4T4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 WWOX-216ENST00000569818 525 ntBASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CR769767.2-201ENST00000622735 460 ntBASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ARHGEF39Q8N4T4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 TMPOP1-202ENST00000424642 1267 ntBASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AC006011.2-201ENST00000621313 1158 ntBASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AC068587.9-201ENST00000641814 219 ntBASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms