Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
XRN1Q8IZH2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC26.36■■□□□ 1.81
XRN1Q8IZH2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
XRN1Q8IZH2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.36■■□□□ 1.81
XRN1Q8IZH2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 Z69720.1-201ENST00000601483 472 ntBASIC26.35■■□□□ 1.81
XRN1Q8IZH2 NSUN5P1-202ENST00000421140 1535 ntBASIC26.35■■□□□ 1.81
XRN1Q8IZH2 NSUN5P2-203ENST00000457352 1529 ntBASIC26.35■■□□□ 1.81
XRN1Q8IZH2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
XRN1Q8IZH2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 AC139530.3-201ENST00000620344 690 ntBASIC26.34■■□□□ 1.81
XRN1Q8IZH2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 AL109659.2-201ENST00000606809 1674 ntBASIC26.34■■□□□ 1.81
XRN1Q8IZH2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 AC079776.4-201ENST00000511039 504 ntBASIC26.34■■□□□ 1.81
XRN1Q8IZH2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 FICD-205ENST00000552758 603 ntTSL 2 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
XRN1Q8IZH2 RCC2P3-201ENST00000418112 1537 ntBASIC26.33■■□□□ 1.81
XRN1Q8IZH2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 IL9RP2-201ENST00000423948 1312 ntBASIC26.33■■□□□ 1.81
XRN1Q8IZH2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 AF238378.1-201ENST00000526806 358 ntBASIC26.33■■□□□ 1.81
XRN1Q8IZH2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 KRT8P7-201ENST00000533003 1432 ntBASIC26.33■■□□□ 1.81
XRN1Q8IZH2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
XRN1Q8IZH2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
XRN1Q8IZH2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
XRN1Q8IZH2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
XRN1Q8IZH2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 NUS1P2-201ENST00000417358 873 ntBASIC26.32■■□□□ 1.8
XRN1Q8IZH2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC26.32■■□□□ 1.8
XRN1Q8IZH2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 TCF3P1-201ENST00000423021 1937 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 IGHGP-201ENST00000390555 1178 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 AP003733.1-201ENST00000491725 852 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 AP001005.1-201ENST00000571755 1248 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 MIR574-201ENST00000385209 96 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 AL773604.1-201ENST00000617417 272 ntBASIC26.31■■□□□ 1.8
XRN1Q8IZH2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
XRN1Q8IZH2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
XRN1Q8IZH2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms