Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 TSPY21P-201ENST00000433481 731 ntBASIC19.3■□□□□ 0.68
CHPFQ8IZ52 TSPY23P-201ENST00000440136 739 ntBASIC19.3■□□□□ 0.68
CHPFQ8IZ52 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPFQ8IZ52 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 FAM86EP-206ENST00000510506 987 ntBASIC19.29■□□□□ 0.68
CHPFQ8IZ52 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 IER3-202ENST00000376377 1350 ntBASIC19.29■□□□□ 0.68
CHPFQ8IZ52 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPFQ8IZ52 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.28■□□□□ 0.68
CHPFQ8IZ52 KRT18P38-201ENST00000449496 1282 ntBASIC19.28■□□□□ 0.68
CHPFQ8IZ52 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 MIR4674-201ENST00000582457 87 ntBASIC19.28■□□□□ 0.68
CHPFQ8IZ52 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHPFQ8IZ52 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 GCSHP2-201ENST00000560971 527 ntBASIC19.27■□□□□ 0.68
CHPFQ8IZ52 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHPFQ8IZ52 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms