Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCUBE3Q8IX30 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 AC018445.3-201ENST00000624177 1945 ntBASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCUBE3Q8IX30 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 AC010947.1-201ENST00000623454 693 ntBASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCUBE3Q8IX30 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms