Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 CDCA4P2-201ENST00000441182 718 ntBASIC20.62■□□□□ 0.89
CNGA4Q8IV77 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 HLA-B-256ENST00000639848 1089 ntBASIC20.62■□□□□ 0.89
CNGA4Q8IV77 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA4Q8IV77 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 AL162741.1-201ENST00000565563 1558 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 AC090340.1-201ENST00000620778 4980 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 AC026185.1-201ENST00000445748 174 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 MIR5787-201ENST00000611784 55 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.61■□□□□ 0.89
CNGA4Q8IV77 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA4Q8IV77 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 AC126763.1-201ENST00000552015 2118 ntBASIC20.6■□□□□ 0.89
CNGA4Q8IV77 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA4Q8IV77 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 AC120498.8-201ENST00000614275 531 ntBASIC20.59■□□□□ 0.89
CNGA4Q8IV77 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNGA4Q8IV77 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.58■□□□□ 0.89
CNGA4Q8IV77 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms