Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 AC026471.5-201ENST00000615068 467 ntBASIC17.78■□□□□ 0.44
CCDC71Q8IV32 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 NBPF21P-201ENST00000425093 1451 ntBASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AC079598.2-202ENST00000546624 1451 ntBASIC17.77■□□□□ 0.44
CCDC71Q8IV32 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 AF186192.3-201ENST00000583427 947 ntBASIC17.77■□□□□ 0.44
CCDC71Q8IV32 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71Q8IV32 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 AC090164.3-201ENST00000610780 2143 ntBASIC17.77■□□□□ 0.43
CCDC71Q8IV32 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71Q8IV32 PCDHB18P-201ENST00000524813 2368 ntBASIC17.76■□□□□ 0.43
CCDC71Q8IV32 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 AL355355.2-201ENST00000442321 338 ntBASIC17.76■□□□□ 0.43
CCDC71Q8IV32 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 AP003071.4-201ENST00000562276 1284 ntBASIC17.76■□□□□ 0.43
CCDC71Q8IV32 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 FP475955.4-201ENST00000623131 1990 ntBASIC17.76■□□□□ 0.43
CCDC71Q8IV32 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC71Q8IV32 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC71Q8IV32 KRT16P5-201ENST00000455284 522 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms