Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 FITM1-202ENST00000559294 800 ntBASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 AP005242.2-201ENST00000580065 1175 ntBASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LYSMD3Q7Z3D4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 TNXA-203ENST00000507684 2038 ntBASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 AP000974.1-201ENST00000623909 2387 ntBASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYSMD3Q7Z3D4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 AC004408.2-201ENST00000623613 2777 ntBASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 KRT8P9-201ENST00000558927 1449 ntBASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYSMD3Q7Z3D4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms