Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 FP475955.4-201ENST00000623131 1990 ntBASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H2AQ7L7L0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 C1QL1P1-201ENST00000568105 661 ntBASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 IRX1P1-201ENST00000438849 1838 ntBASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST3H2AQ7L7L0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST3H2AQ7L7L0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 KRT16P5-201ENST00000455284 522 ntBASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 AC233263.1-201ENST00000578059 224 ntBASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 AL049812.1-201ENST00000432563 2267 ntBASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HIST3H2AQ7L7L0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms