Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 AL138781.2-201ENST00000617896 1843 ntBASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 AC004408.2-201ENST00000623613 2777 ntBASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST2H3AQ71DI3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 KRT16P1-201ENST00000399124 1418 ntBASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC026271.3-201ENST00000571884 352 ntBASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC073195.1-201ENST00000607241 877 ntBASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST2H3AQ71DI3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 KRT8P11-201ENST00000409686 1436 ntBASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST2H3AQ71DI3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HIST2H3AQ71DI3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 RCC2P6-201ENST00000526625 1557 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AC091390.4-202ENST00000476426 537 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 FAM197Y4-202ENST00000622692 608 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AC083906.6-201ENST00000641366 219 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 AL031985.4-201ENST00000642138 673 ntBASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HIST2H3AQ71DI3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms