Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RNF213Q63HN8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RNF213Q63HN8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RNF213Q63HN8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RNF213Q63HN8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
RNF213Q63HN8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.13□□□□□ -0.79
RNF213Q63HN8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RNF213Q63HN8 AL359881.2-201ENST00000602973 570 ntBASIC10.13□□□□□ -0.79
RNF213Q63HN8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.13□□□□□ -0.79
RNF213Q63HN8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 RNA5SP416-201ENST00000516838 111 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 DUT-210ENST00000559935 569 ntTSL 3 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 AC069262.1-201ENST00000539058 672 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 AC093520.2-201ENST00000561830 333 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 KRT18P23-201ENST00000435622 1283 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 ATP5G2P4-201ENST00000442175 420 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 AL390955.2-201ENST00000603032 514 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 AC007967.2-201ENST00000432613 625 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC10.12□□□□□ -0.79
RNF213Q63HN8 AJ011932.1-201ENST00000621707 465 ntBASIC10.12□□□□□ -0.79
RNF213Q63HN8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RNF213Q63HN8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC002472.2-201ENST00000442739 958 ntBASIC10.11□□□□□ -0.79
RNF213Q63HN8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 DPP3P2-201ENST00000416030 1696 ntBASIC10.11□□□□□ -0.79
RNF213Q63HN8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC096582.2-201ENST00000510860 516 ntBASIC10.11□□□□□ -0.79
RNF213Q63HN8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RNF213Q63HN8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC10.11□□□□□ -0.79
RNF213Q63HN8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms