Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.14■□□□□ 0.65
LGSNQ5TDP6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 AC073111.5-205ENST00000641717 521 ntBASIC19.13■□□□□ 0.65
LGSNQ5TDP6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGSNQ5TDP6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 AC026185.1-201ENST00000445748 174 ntBASIC19.12■□□□□ 0.65
LGSNQ5TDP6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 AC092118.2-201ENST00000613495 667 ntBASIC19.12■□□□□ 0.65
LGSNQ5TDP6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
LGSNQ5TDP6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 AC092666.2-201ENST00000613287 246 ntBASIC19.11■□□□□ 0.65
LGSNQ5TDP6 AL050303.2-201ENST00000619798 666 ntBASIC19.11■□□□□ 0.65
LGSNQ5TDP6 AL121829.2-201ENST00000620908 328 ntBASIC19.11■□□□□ 0.65
LGSNQ5TDP6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 AL354751.1-201ENST00000412768 1863 ntBASIC19.11■□□□□ 0.65
LGSNQ5TDP6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.11■□□□□ 0.65
LGSNQ5TDP6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 AC092368.3-202ENST00000574180 1591 ntBASIC19.1■□□□□ 0.65
LGSNQ5TDP6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms