Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 HLA-J-201ENST00000462773 1622 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 ELL2P1-201ENST00000413990 1906 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AC079834.2-201ENST00000609776 1949 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC093214.1-201ENST00000511688 1107 ntBASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 HILS1-202ENST00000545329 423 ntBASIC10.37□□□□□ -0.75
UBR4Q5T4S7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 AC092506.1-202ENST00000401022 528 ntBASIC10.37□□□□□ -0.75
UBR4Q5T4S7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.37□□□□□ -0.75
UBR4Q5T4S7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 RNA5SP423-201ENST00000517127 109 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 ANKRD20A8P-203ENST00000641373 517 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AC124864.1-201ENST00000623408 392 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 KRT18P23-201ENST00000435622 1283 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 KRT8P17-201ENST00000453110 1448 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.36□□□□□ -0.75
UBR4Q5T4S7 AL033527.4-201ENST00000641026 673 ntBASIC10.36□□□□□ -0.75
UBR4Q5T4S7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AC109322.1-201ENST00000524499 1264 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 DUX4L27-201ENST00000554796 1261 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 RN7SL190P-201ENST00000582519 257 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AC002310.6-201ENST00000624451 1377 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms