Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 HBZP1-201ENST00000354915 429 ntBASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 UNC93B7-201ENST00000509439 705 ntBASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTC1Q2NKJ3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
CTC1Q2NKJ3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTC1Q2NKJ3 AC116562.4-201ENST00000641316 2276 ntBASIC20.27■□□□□ 0.83
CTC1Q2NKJ3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 MIR3180-1-201ENST00000580374 94 ntBASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 MIR3180-3-201ENST00000584616 94 ntBASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.26■□□□□ 0.83
CTC1Q2NKJ3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 AL645929.1-201ENST00000420084 975 ntBASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 GPALPP1-207ENST00000611650 899 ntBASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTC1Q2NKJ3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms