Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 AL359075.1-203ENST00000462729 1002 ntBASIC20.7■□□□□ 0.9
CDC42EP1Q00587 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42EP1Q00587 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 AP000550.4-202ENST00000639755 178 ntBASIC20.69■□□□□ 0.9
CDC42EP1Q00587 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP1Q00587 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 FAM86EP-206ENST00000510506 987 ntBASIC20.68■□□□□ 0.9
CDC42EP1Q00587 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42EP1Q00587 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 IRX1P1-201ENST00000438849 1838 ntBASIC20.67■□□□□ 0.9
CDC42EP1Q00587 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 AL136038.3-201ENST00000561909 1096 ntBASIC20.67■□□□□ 0.9
CDC42EP1Q00587 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 AL358472.4-201ENST00000633140 710 ntBASIC20.67■□□□□ 0.9
CDC42EP1Q00587 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 KRT8P32-201ENST00000512863 1461 ntBASIC20.67■□□□□ 0.9
CDC42EP1Q00587 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 AC036111.1-201ENST00000533973 1582 ntBASIC20.67■□□□□ 0.9
CDC42EP1Q00587 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP1Q00587 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 AC112907.2-201ENST00000448639 330 ntBASIC20.66■□□□□ 0.9
CDC42EP1Q00587 KRT18P38-201ENST00000449496 1282 ntBASIC20.66■□□□□ 0.9
CDC42EP1Q00587 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms