Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRA2BP62995 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.91■□□□□ 0.46
TRA2BP62995 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.91■□□□□ 0.46
TRA2BP62995 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRA2BP62995 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.91■□□□□ 0.46
TRA2BP62995 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRA2BP62995 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
TRA2BP62995 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.91■□□□□ 0.46
TRA2BP62995 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.91■□□□□ 0.46
TRA2BP62995 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRA2BP62995 AC120498.9-201ENST00000339021 3867 ntBASIC17.91■□□□□ 0.46
TRA2BP62995 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRA2BP62995 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
TRA2BP62995 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
TRA2BP62995 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRA2BP62995 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
TRA2BP62995 AC096733.2-201ENST00000609937 1394 ntBASIC17.91■□□□□ 0.46
TRA2BP62995 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 KRT8P32-201ENST00000512863 1461 ntBASIC17.9■□□□□ 0.46
TRA2BP62995 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRA2BP62995 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.9■□□□□ 0.46
TRA2BP62995 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.9■□□□□ 0.46
TRA2BP62995 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRA2BP62995 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.9■□□□□ 0.46
TRA2BP62995 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
TRA2BP62995 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRA2BP62995 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.9■□□□□ 0.46
TRA2BP62995 HEIH-201ENST00000623091 1652 ntBASIC17.9■□□□□ 0.46
TRA2BP62995 AL020996.1-203ENST00000536896 2307 ntBASIC17.89■□□□□ 0.46
TRA2BP62995 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.89■□□□□ 0.45
TRA2BP62995 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRA2BP62995 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 MIR718-201ENST00000390190 70 ntBASIC17.89■□□□□ 0.45
TRA2BP62995 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.89■□□□□ 0.45
TRA2BP62995 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.89■□□□□ 0.45
TRA2BP62995 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.89■□□□□ 0.45
TRA2BP62995 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TRA2BP62995 AC068587.9-201ENST00000641814 219 ntBASIC17.89■□□□□ 0.45
TRA2BP62995 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRA2BP62995 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRA2BP62995 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRA2BP62995 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.88■□□□□ 0.45
TRA2BP62995 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.88■□□□□ 0.45
TRA2BP62995 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 AL355355.2-201ENST00000442321 338 ntBASIC17.88■□□□□ 0.45
TRA2BP62995 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.88■□□□□ 0.45
TRA2BP62995 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.88■□□□□ 0.45
TRA2BP62995 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.88■□□□□ 0.45
TRA2BP62995 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.88■□□□□ 0.45
TRA2BP62995 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRA2BP62995 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRA2BP62995 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TRA2BP62995 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRA2BP62995 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.88■□□□□ 0.45
TRA2BP62995 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms