Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAB11AP62491 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
RAB11AP62491 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.41■□□□□ 0.06
RAB11AP62491 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 AL390719.1-204ENST00000412397 1219 ntBASIC15.41■□□□□ 0.06
RAB11AP62491 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB11AP62491 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB11AP62491 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB11AP62491 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB11AP62491 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB11AP62491 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 TFP1-202ENST00000475455 1573 ntBASIC15.41■□□□□ 0.06
RAB11AP62491 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB11AP62491 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB11AP62491 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB11AP62491 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB11AP62491 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 Z98044.1-201ENST00000632503 1764 ntBASIC15.4■□□□□ 0.06
RAB11AP62491 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 LSM12P1-201ENST00000411836 588 ntBASIC15.4■□□□□ 0.06
RAB11AP62491 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB11AP62491 AC007322.1-201ENST00000426983 750 ntBASIC15.4■□□□□ 0.06
RAB11AP62491 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 AC011767.1-201ENST00000617410 1153 ntBASIC15.4■□□□□ 0.06
RAB11AP62491 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB11AP62491 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB11AP62491 WIZP1-201ENST00000531444 2299 ntBASIC15.4■□□□□ 0.06
RAB11AP62491 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB11AP62491 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB11AP62491 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB11AP62491 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB11AP62491 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.39■□□□□ 0.05
RAB11AP62491 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB11AP62491 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
RAB11AP62491 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB11AP62491 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB11AP62491 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB11AP62491 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB11AP62491 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB11AP62491 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB11AP62491 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms