Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.1■□□□□ 0.65
AP1S1P61966 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
AP1S1P61966 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.09■□□□□ 0.65
AP1S1P61966 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.09■□□□□ 0.65
AP1S1P61966 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.09■□□□□ 0.65
AP1S1P61966 AP003041.3-201ENST00000527151 707 ntBASIC19.09■□□□□ 0.65
AP1S1P61966 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
AP1S1P61966 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.09■□□□□ 0.65
AP1S1P61966 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S1P61966 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S1P61966 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S1P61966 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S1P61966 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S1P61966 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S1P61966 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.08■□□□□ 0.65
AP1S1P61966 INGX-201ENST00000359239 846 ntBASIC19.08■□□□□ 0.64
AP1S1P61966 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.08■□□□□ 0.64
AP1S1P61966 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
AP1S1P61966 HMGA1P5-201ENST00000412453 271 ntBASIC19.08■□□□□ 0.64
AP1S1P61966 ECEL1P2-202ENST00000465689 757 ntBASIC19.08■□□□□ 0.64
AP1S1P61966 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.08■□□□□ 0.64
AP1S1P61966 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.08■□□□□ 0.64
AP1S1P61966 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.08■□□□□ 0.64
AP1S1P61966 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
AP1S1P61966 AC008622.2-201ENST00000617006 1229 ntBASIC19.08■□□□□ 0.64
AP1S1P61966 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.08■□□□□ 0.64
AP1S1P61966 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
AP1S1P61966 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP1S1P61966 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP1S1P61966 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP1S1P61966 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.08■□□□□ 0.64
AP1S1P61966 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP1S1P61966 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
AP1S1P61966 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.07■□□□□ 0.64
AP1S1P61966 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 AL512353.2-201ENST00000448759 1962 ntBASIC19.07■□□□□ 0.64
AP1S1P61966 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.07■□□□□ 0.64
AP1S1P61966 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.07■□□□□ 0.64
AP1S1P61966 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.07■□□□□ 0.64
AP1S1P61966 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.07■□□□□ 0.64
AP1S1P61966 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 ECEL1P3-201ENST00000427961 737 ntBASIC19.07■□□□□ 0.64
AP1S1P61966 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.07■□□□□ 0.64
AP1S1P61966 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
AP1S1P61966 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
AP1S1P61966 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
AP1S1P61966 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S1P61966 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP1S1P61966 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
AP1S1P61966 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
AP1S1P61966 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.06■□□□□ 0.64
AP1S1P61966 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
AP1S1P61966 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AP1S1P61966 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.06■□□□□ 0.64
AP1S1P61966 SLC25A3P1-201ENST00000443844 931 ntBASIC19.06■□□□□ 0.64
AP1S1P61966 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.06■□□□□ 0.64
AP1S1P61966 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.06■□□□□ 0.64
AP1S1P61966 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.06■□□□□ 0.64
AP1S1P61966 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 AC005363.2-201ENST00000618631 242 ntBASIC19.06■□□□□ 0.64
AP1S1P61966 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms