Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 RPS2P52-201ENST00000469610 820 ntBASIC15.42■□□□□ 0.06
SPCS3P61009 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 AC105036.2-201ENST00000569468 176 ntBASIC15.42■□□□□ 0.06
SPCS3P61009 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.42■□□□□ 0.06
SPCS3P61009 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.42■□□□□ 0.06
SPCS3P61009 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.41■□□□□ 0.06
SPCS3P61009 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SPCS3P61009 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.41■□□□□ 0.06
SPCS3P61009 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SPCS3P61009 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
SPCS3P61009 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 AC004911.1-201ENST00000416316 871 ntBASIC15.41■□□□□ 0.06
SPCS3P61009 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.41■□□□□ 0.06
SPCS3P61009 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.41■□□□□ 0.06
SPCS3P61009 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 AL121906.2-201ENST00000621597 723 ntBASIC15.41■□□□□ 0.06
SPCS3P61009 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SPCS3P61009 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SPCS3P61009 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SPCS3P61009 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SPCS3P61009 PRORSD1P-202ENST00000563365 2154 ntBASIC15.41■□□□□ 0.06
SPCS3P61009 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPCS3P61009 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.4■□□□□ 0.06
SPCS3P61009 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.4■□□□□ 0.06
SPCS3P61009 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.4■□□□□ 0.06
SPCS3P61009 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 AC026271.2-201ENST00000428091 497 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.4■□□□□ 0.06
SPCS3P61009 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.4■□□□□ 0.06
SPCS3P61009 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 AC139713.2-201ENST00000641328 2723 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 AC135050.7-201ENST00000624508 2218 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 AL512353.2-201ENST00000448759 1962 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPCS3P61009 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 FEM1AP3-201ENST00000403722 1741 ntBASIC15.4■□□□□ 0.06
SPCS3P61009 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
SPCS3P61009 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SPCS3P61009 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms