Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.58■□□□□ 0.73
EIF3EP60228 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.58■□□□□ 0.72
EIF3EP60228 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.58■□□□□ 0.72
EIF3EP60228 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
EIF3EP60228 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.58■□□□□ 0.72
EIF3EP60228 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.58■□□□□ 0.72
EIF3EP60228 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EIF3EP60228 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.57■□□□□ 0.72
EIF3EP60228 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
EIF3EP60228 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
EIF3EP60228 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3EP60228 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
EIF3EP60228 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.56■□□□□ 0.72
EIF3EP60228 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.56■□□□□ 0.72
EIF3EP60228 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
EIF3EP60228 AL445675.2-201ENST00000620291 557 ntBASIC19.56■□□□□ 0.72
EIF3EP60228 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.56■□□□□ 0.72
EIF3EP60228 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3EP60228 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
EIF3EP60228 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3EP60228 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EIF3EP60228 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.55■□□□□ 0.72
EIF3EP60228 AC009113.1-201ENST00000570267 2443 ntBASIC19.55■□□□□ 0.72
EIF3EP60228 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 AC128676.1-201ENST00000454392 318 ntBASIC19.55■□□□□ 0.72
EIF3EP60228 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 CD99P1-205ENST00000527459 561 ntBASIC19.55■□□□□ 0.72
EIF3EP60228 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EIF3EP60228 AC131212.4-201ENST00000623606 975 ntBASIC19.55■□□□□ 0.72
EIF3EP60228 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.55■□□□□ 0.72
EIF3EP60228 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3EP60228 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms