Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN20P56880 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN20P56880 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN20P56880 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN20P56880 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN20P56880 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN20P56880 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 RBM17P1-201ENST00000453646 1190 ntBASIC17.38■□□□□ 0.37
CLDN20P56880 B3GAT3P1-201ENST00000471720 806 ntBASIC17.38■□□□□ 0.37
CLDN20P56880 Z85996.1-201ENST00000494644 937 ntBASIC17.38■□□□□ 0.37
CLDN20P56880 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN20P56880 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN20P56880 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CLDN20P56880 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN20P56880 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN20P56880 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.38■□□□□ 0.37
CLDN20P56880 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN20P56880 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 RCC2P6-201ENST00000526625 1557 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN20P56880 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLDN20P56880 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN20P56880 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 BX088651.1-201ENST00000540551 451 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 ZNF815P-204ENST00000434898 1737 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN20P56880 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN20P56880 AC079598.2-202ENST00000546624 1451 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 FSCN1P1-201ENST00000568912 1481 ntBASIC17.37■□□□□ 0.37
CLDN20P56880 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN20P56880 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN20P56880 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN20P56880 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.36■□□□□ 0.37
CLDN20P56880 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN20P56880 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.36■□□□□ 0.37
CLDN20P56880 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN20P56880 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN20P56880 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN20P56880 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN20P56880 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN20P56880 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms