Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
WNT3P56703 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
WNT3P56703 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
WNT3P56703 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.95■□□□□ 0.46
WNT3P56703 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.95■□□□□ 0.46
WNT3P56703 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 KRASP1-201ENST00000407852 552 ntBASIC17.95■□□□□ 0.46
WNT3P56703 AC239809.2-201ENST00000415381 517 ntBASIC17.95■□□□□ 0.46
WNT3P56703 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.95■□□□□ 0.46
WNT3P56703 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.95■□□□□ 0.46
WNT3P56703 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.95■□□□□ 0.46
WNT3P56703 AC124016.1-201ENST00000609552 612 ntBASIC17.95■□□□□ 0.46
WNT3P56703 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.95■□□□□ 0.46
WNT3P56703 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3P56703 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3P56703 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.94■□□□□ 0.46
WNT3P56703 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
WNT3P56703 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.94■□□□□ 0.46
WNT3P56703 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.94■□□□□ 0.46
WNT3P56703 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 KRT16P5-201ENST00000455284 522 ntBASIC17.94■□□□□ 0.46
WNT3P56703 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.94■□□□□ 0.46
WNT3P56703 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.94■□□□□ 0.46
WNT3P56703 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.94■□□□□ 0.46
WNT3P56703 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
WNT3P56703 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
WNT3P56703 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
WNT3P56703 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.93■□□□□ 0.46
WNT3P56703 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
WNT3P56703 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.93■□□□□ 0.46
WNT3P56703 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.93■□□□□ 0.46
WNT3P56703 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.93■□□□□ 0.46
WNT3P56703 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 BICD1-207ENST00000551848 1962 ntBASIC17.93■□□□□ 0.46
WNT3P56703 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
WNT3P56703 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
WNT3P56703 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.92■□□□□ 0.46
WNT3P56703 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.92■□□□□ 0.46
WNT3P56703 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
WNT3P56703 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
WNT3P56703 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.92■□□□□ 0.46
WNT3P56703 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
WNT3P56703 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
WNT3P56703 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
WNT3P56703 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms