Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR1P51861 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 KRT16P1-201ENST00000399124 1418 ntBASIC20.73■□□□□ 0.91
CDR1P51861 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 MIR1238-201ENST00000408483 83 ntBASIC20.73■□□□□ 0.91
CDR1P51861 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR1P51861 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CDR1P51861 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.73■□□□□ 0.91
CDR1P51861 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR1P51861 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.73■□□□□ 0.91
CDR1P51861 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.73■□□□□ 0.91
CDR1P51861 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDR1P51861 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR1P51861 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.72■□□□□ 0.91
CDR1P51861 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
CDR1P51861 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR1P51861 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDR1P51861 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR1P51861 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.72■□□□□ 0.91
CDR1P51861 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR1P51861 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.72■□□□□ 0.91
CDR1P51861 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR1P51861 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDR1P51861 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR1P51861 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR1P51861 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDR1P51861 KSR1P1-201ENST00000446298 240 ntBASIC20.71■□□□□ 0.91
CDR1P51861 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.71■□□□□ 0.91
CDR1P51861 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR1P51861 AC011506.1-201ENST00000474329 610 ntBASIC20.71■□□□□ 0.91
CDR1P51861 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR1P51861 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.71■□□□□ 0.91
CDR1P51861 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
CDR1P51861 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.71■□□□□ 0.91
CDR1P51861 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CDR1P51861 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.71■□□□□ 0.91
CDR1P51861 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR1P51861 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDR1P51861 AC004408.2-201ENST00000623613 2777 ntBASIC20.7■□□□□ 0.9
CDR1P51861 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.7■□□□□ 0.9
CDR1P51861 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDR1P51861 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.7■□□□□ 0.9
CDR1P51861 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.7■□□□□ 0.9
CDR1P51861 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDR1P51861 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.7■□□□□ 0.9
CDR1P51861 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.7■□□□□ 0.9
CDR1P51861 HLA-A-209ENST00000638375 975 ntBASIC20.7■□□□□ 0.9
CDR1P51861 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.7■□□□□ 0.9
CDR1P51861 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDR1P51861 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms