Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CLCNKAP51800 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCNKAP51800 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 AP003041.3-201ENST00000527151 707 ntBASIC18.59■□□□□ 0.57
CLCNKAP51800 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCNKAP51800 AL138966.2-201ENST00000621997 464 ntBASIC18.59■□□□□ 0.57
CLCNKAP51800 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCNKAP51800 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCNKAP51800 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCNKAP51800 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCNKAP51800 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCNKAP51800 AC141586.3-201ENST00000562166 1838 ntBASIC18.58■□□□□ 0.57
CLCNKAP51800 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCNKAP51800 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCNKAP51800 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLCNKAP51800 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.58■□□□□ 0.57
CLCNKAP51800 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCNKAP51800 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCNKAP51800 ATP5G1P1-201ENST00000448724 379 ntBASIC18.58■□□□□ 0.56
CLCNKAP51800 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CLCNKAP51800 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CLCNKAP51800 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCNKAP51800 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCNKAP51800 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CLCNKAP51800 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCNKAP51800 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCNKAP51800 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCNKAP51800 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLCNKAP51800 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCNKAP51800 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCNKAP51800 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 BX664615.1-201ENST00000443558 458 ntBASIC18.57■□□□□ 0.56
CLCNKAP51800 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.57■□□□□ 0.56
CLCNKAP51800 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.57■□□□□ 0.56
CLCNKAP51800 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CLCNKAP51800 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.57■□□□□ 0.56
CLCNKAP51800 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCNKAP51800 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 KRT8P3-201ENST00000519669 1449 ntBASIC18.57■□□□□ 0.56
CLCNKAP51800 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCNKAP51800 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLCNKAP51800 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLCNKAP51800 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 AC005332.7-201ENST00000614046 2005 ntBASIC18.56■□□□□ 0.56
CLCNKAP51800 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 KRT18P57-201ENST00000443599 1254 ntBASIC18.56■□□□□ 0.56
CLCNKAP51800 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCNKAP51800 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CLCNKAP51800 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCNKAP51800 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCNKAP51800 IRX1P1-201ENST00000438849 1838 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms