Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 PVRIG2P-201ENST00000435460 978 ntBASIC19.82■□□□□ 0.76
MTHFRP42898 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.82■□□□□ 0.76
MTHFRP42898 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.82■□□□□ 0.76
MTHFRP42898 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 AP002414.4-201ENST00000589764 1148 ntBASIC19.82■□□□□ 0.76
MTHFRP42898 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MTHFRP42898 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.82■□□□□ 0.76
MTHFRP42898 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.82■□□□□ 0.76
MTHFRP42898 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MTHFRP42898 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
MTHFRP42898 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
MTHFRP42898 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
MTHFRP42898 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.82■□□□□ 0.76
MTHFRP42898 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.81■□□□□ 0.76
MTHFRP42898 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.81■□□□□ 0.76
MTHFRP42898 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.81■□□□□ 0.76
MTHFRP42898 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MTHFRP42898 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MTHFRP42898 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
MTHFRP42898 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 AC093525.10-201ENST00000625130 1569 ntBASIC19.81■□□□□ 0.76
MTHFRP42898 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.81■□□□□ 0.76
MTHFRP42898 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.81■□□□□ 0.76
MTHFRP42898 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
MTHFRP42898 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MTHFRP42898 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MTHFRP42898 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
MTHFRP42898 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
MTHFRP42898 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MTHFRP42898 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
MTHFRP42898 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
MTHFRP42898 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.8■□□□□ 0.76
MTHFRP42898 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MTHFRP42898 CHCHD2P8-201ENST00000429873 447 ntBASIC19.8■□□□□ 0.76
MTHFRP42898 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.8■□□□□ 0.76
MTHFRP42898 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.8■□□□□ 0.76
MTHFRP42898 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.8■□□□□ 0.76
MTHFRP42898 IFNL4P1-201ENST00000607083 540 ntBASIC19.8■□□□□ 0.76
MTHFRP42898 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MTHFRP42898 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MTHFRP42898 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
MTHFRP42898 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.79■□□□□ 0.76
MTHFRP42898 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
MTHFRP42898 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MTHFRP42898 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MTHFRP42898 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.79■□□□□ 0.76
MTHFRP42898 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MTHFRP42898 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.79■□□□□ 0.76
MTHFRP42898 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.79■□□□□ 0.76
MTHFRP42898 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MTHFRP42898 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.79■□□□□ 0.76
MTHFRP42898 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.79■□□□□ 0.76
MTHFRP42898 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms