Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC098818.2-201ENST00000564925 2320 ntBASIC18.9■□□□□ 0.62
HMGCLP35914 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMGCLP35914 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCLP35914 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 AL023803.3-201ENST00000615559 522 ntBASIC18.89■□□□□ 0.61
HMGCLP35914 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCLP35914 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCLP35914 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCLP35914 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
HMGCLP35914 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCLP35914 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCLP35914 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCLP35914 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCLP35914 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGCLP35914 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCLP35914 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 TSPY14P-201ENST00000303979 915 ntBASIC18.88■□□□□ 0.61
HMGCLP35914 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.88■□□□□ 0.61
HMGCLP35914 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCLP35914 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.88■□□□□ 0.61
HMGCLP35914 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCLP35914 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 AL512353.2-201ENST00000448759 1962 ntBASIC18.88■□□□□ 0.61
HMGCLP35914 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMGCLP35914 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMGCLP35914 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCLP35914 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCLP35914 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCLP35914 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
HMGCLP35914 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 CYP2D8P-201ENST00000433633 1490 ntBASIC18.87■□□□□ 0.61
HMGCLP35914 CCR12P-201ENST00000446203 998 ntBASIC18.87■□□□□ 0.61
HMGCLP35914 TSPY17P-201ENST00000450329 467 ntBASIC18.87■□□□□ 0.61
HMGCLP35914 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.87■□□□□ 0.61
HMGCLP35914 KRT8P9-201ENST00000558927 1449 ntBASIC18.87■□□□□ 0.61
HMGCLP35914 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
HMGCLP35914 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMGCLP35914 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCLP35914 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCLP35914 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMGCLP35914 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMGCLP35914 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMGCLP35914 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 KRT8P32-201ENST00000512863 1461 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
HMGCLP35914 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 EGLN1P1-201ENST00000531623 762 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 AL353719.1-201ENST00000566847 864 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.86■□□□□ 0.61
HMGCLP35914 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 AC010947.1-201ENST00000623454 693 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 AC083906.6-201ENST00000641366 219 ntBASIC18.86■□□□□ 0.61
HMGCLP35914 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms