Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT2P35908 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.76■■□□□ 1.07
KRT2P35908 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT2P35908 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT2P35908 CROCCP3-202ENST00000420820 1947 ntBASIC21.76■■□□□ 1.07
KRT2P35908 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT2P35908 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT2P35908 AC004408.2-201ENST00000623613 2777 ntBASIC21.76■■□□□ 1.07
KRT2P35908 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KRT2P35908 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT2P35908 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT2P35908 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT2P35908 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 AC097488.1-201ENST00000507834 756 ntBASIC21.75■■□□□ 1.07
KRT2P35908 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.75■■□□□ 1.07
KRT2P35908 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.75■■□□□ 1.07
KRT2P35908 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT2P35908 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.75■■□□□ 1.07
KRT2P35908 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KRT2P35908 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT2P35908 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT2P35908 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT2P35908 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KRT2P35908 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KRT2P35908 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
KRT2P35908 MFAP1P1-201ENST00000442257 1255 ntBASIC21.74■■□□□ 1.07
KRT2P35908 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT2P35908 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.74■■□□□ 1.07
KRT2P35908 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT2P35908 AC083906.6-201ENST00000641366 219 ntBASIC21.74■■□□□ 1.07
KRT2P35908 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT2P35908 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT2P35908 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT2P35908 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
KRT2P35908 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
KRT2P35908 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT2P35908 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
KRT2P35908 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT2P35908 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT2P35908 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT2P35908 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT2P35908 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT2P35908 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 KRT8P3-201ENST00000519669 1449 ntBASIC21.72■■□□□ 1.07
KRT2P35908 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KRT2P35908 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.72■■□□□ 1.07
KRT2P35908 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT2P35908 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT2P35908 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT2P35908 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT2P35908 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT2P35908 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT2P35908 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT2P35908 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT2P35908 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KRT2P35908 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KRT2P35908 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT2P35908 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms