Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP24386 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP24386 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.73■□□□□ 0.43
CHMP24386 MIR4497-201ENST00000583208 89 ntBASIC17.73■□□□□ 0.43
CHMP24386 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMP24386 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CHMP24386 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CHMP24386 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CHMP24386 AL596275.1-201ENST00000423464 877 ntBASIC17.72■□□□□ 0.43
CHMP24386 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.72■□□□□ 0.43
CHMP24386 KRT18P16-201ENST00000510337 1294 ntBASIC17.72■□□□□ 0.43
CHMP24386 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.72■□□□□ 0.43
CHMP24386 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMP24386 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CHMP24386 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMP24386 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP24386 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP24386 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHMP24386 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP24386 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP24386 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.71■□□□□ 0.43
CHMP24386 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP24386 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 TUBB8P6-201ENST00000436895 1288 ntBASIC17.71■□□□□ 0.43
CHMP24386 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.71■□□□□ 0.43
CHMP24386 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.71■□□□□ 0.43
CHMP24386 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CHMP24386 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 AL353708.3-201ENST00000610272 989 ntBASIC17.71■□□□□ 0.43
CHMP24386 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 AL049637.2-201ENST00000641778 930 ntBASIC17.71■□□□□ 0.43
CHMP24386 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP24386 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CHMP24386 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP24386 AIRN-201ENST00000601203 4374 ntBASIC17.71■□□□□ 0.43
CHMP24386 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP24386 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP24386 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP24386 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP24386 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHMP24386 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHMP24386 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms