Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH3P22223 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH3P22223 AC091390.4-202ENST00000476426 537 ntBASIC18.56■□□□□ 0.56
CDH3P22223 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH3P22223 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH3P22223 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.56■□□□□ 0.56
CDH3P22223 AP000692.2-201ENST00000608391 879 ntBASIC18.56■□□□□ 0.56
CDH3P22223 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH3P22223 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH3P22223 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH3P22223 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH3P22223 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH3P22223 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH3P22223 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
CDH3P22223 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH3P22223 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH3P22223 AC008040.2-201ENST00000461049 708 ntBASIC18.55■□□□□ 0.56
CDH3P22223 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH3P22223 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH3P22223 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CDH3P22223 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH3P22223 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH3P22223 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDH3P22223 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH3P22223 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.54■□□□□ 0.56
CDH3P22223 C2orf69P3-201ENST00000565542 1120 ntBASIC18.54■□□□□ 0.56
CDH3P22223 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH3P22223 AP005242.2-201ENST00000580065 1175 ntBASIC18.54■□□□□ 0.56
CDH3P22223 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CDH3P22223 AC097493.4-201ENST00000641197 219 ntBASIC18.54■□□□□ 0.56
CDH3P22223 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH3P22223 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CDH3P22223 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH3P22223 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH3P22223 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH3P22223 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CDH3P22223 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 AC005332.8-201ENST00000622750 2735 ntBASIC18.53■□□□□ 0.56
CDH3P22223 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH3P22223 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms