Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AL355355.2-201ENST00000442321 338 ntBASIC19.16■□□□□ 0.66
HLA-DPA1P20036 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 CKBP1-201ENST00000565489 1086 ntBASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC026471.5-201ENST00000615068 467 ntBASIC19.16■□□□□ 0.66
HLA-DPA1P20036 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC087289.5-201ENST00000586076 3175 ntBASIC19.16■□□□□ 0.66
HLA-DPA1P20036 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPA1P20036 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 AC120498.9-201ENST00000339021 3867 ntBASIC19.15■□□□□ 0.66
HLA-DPA1P20036 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TNXA-203ENST00000507684 2038 ntBASIC19.15■□□□□ 0.66
HLA-DPA1P20036 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPA1P20036 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DPA1P20036 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPA1P20036 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 AC006333.2-201ENST00000607957 2099 ntBASIC19.13■□□□□ 0.65
HLA-DPA1P20036 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms