Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.34■□□□□ 0.53
LBPP18428 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.34■□□□□ 0.53
LBPP18428 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.34■□□□□ 0.53
LBPP18428 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
LBPP18428 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBPP18428 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
LBPP18428 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBPP18428 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.33■□□□□ 0.53
LBPP18428 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBPP18428 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LBPP18428 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBPP18428 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.33■□□□□ 0.53
LBPP18428 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBPP18428 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBPP18428 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.33■□□□□ 0.52
LBPP18428 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.33■□□□□ 0.52
LBPP18428 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
LBPP18428 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.33■□□□□ 0.52
LBPP18428 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.33■□□□□ 0.52
LBPP18428 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.33■□□□□ 0.52
LBPP18428 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.33■□□□□ 0.52
LBPP18428 AC008687.6-201ENST00000596318 630 ntBASIC18.33■□□□□ 0.52
LBPP18428 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.33■□□□□ 0.52
LBPP18428 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LBPP18428 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
LBPP18428 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
LBPP18428 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LBPP18428 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBPP18428 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
LBPP18428 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.32■□□□□ 0.52
LBPP18428 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
LBPP18428 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
LBPP18428 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.32■□□□□ 0.52
LBPP18428 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 SOX15-203ENST00000570788 1093 ntBASIC18.32■□□□□ 0.52
LBPP18428 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LBPP18428 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LBPP18428 AC018470.1-201ENST00000624790 3129 ntBASIC18.32■□□□□ 0.52
LBPP18428 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LBPP18428 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 NCF1B-203ENST00000435988 1254 ntBASIC18.31■□□□□ 0.52
LBPP18428 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.31■□□□□ 0.52
LBPP18428 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LBPP18428 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.31■□□□□ 0.52
LBPP18428 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LBPP18428 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBPP18428 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBPP18428 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LBPP18428 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBPP18428 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.3■□□□□ 0.52
LBPP18428 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms