Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.93■□□□□ 0.46
NCK1P16333 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.93■□□□□ 0.46
NCK1P16333 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.93■□□□□ 0.46
NCK1P16333 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NCK1P16333 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.92■□□□□ 0.46
NCK1P16333 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.92■□□□□ 0.46
NCK1P16333 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.92■□□□□ 0.46
NCK1P16333 AC073210.2-201ENST00000430369 194 ntBASIC17.92■□□□□ 0.46
NCK1P16333 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.92■□□□□ 0.46
NCK1P16333 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
NCK1P16333 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NCK1P16333 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCK1P16333 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
NCK1P16333 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NCK1P16333 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.91■□□□□ 0.46
NCK1P16333 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 AC004911.1-201ENST00000416316 871 ntBASIC17.91■□□□□ 0.46
NCK1P16333 BX276092.2-201ENST00000417668 665 ntBASIC17.91■□□□□ 0.46
NCK1P16333 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 YBX1P10-201ENST00000444752 975 ntBASIC17.91■□□□□ 0.46
NCK1P16333 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.91■□□□□ 0.46
NCK1P16333 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.91■□□□□ 0.46
NCK1P16333 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.91■□□□□ 0.46
NCK1P16333 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.91■□□□□ 0.46
NCK1P16333 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.91■□□□□ 0.46
NCK1P16333 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.91■□□□□ 0.46
NCK1P16333 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
NCK1P16333 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCK1P16333 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.9■□□□□ 0.46
NCK1P16333 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 MKRN4P-201ENST00000444706 1521 ntBASIC17.9■□□□□ 0.46
NCK1P16333 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NCK1P16333 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCK1P16333 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.9■□□□□ 0.46
NCK1P16333 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.9■□□□□ 0.46
NCK1P16333 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms