Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PEPDP12955 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PEPDP12955 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.55■□□□□ 0.4
PEPDP12955 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PEPDP12955 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.55■□□□□ 0.4
PEPDP12955 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.55■□□□□ 0.4
PEPDP12955 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 AL445675.2-201ENST00000620291 557 ntBASIC17.55■□□□□ 0.4
PEPDP12955 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
PEPDP12955 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.55■□□□□ 0.4
PEPDP12955 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PEPDP12955 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.55■□□□□ 0.4
PEPDP12955 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.55■□□□□ 0.4
PEPDP12955 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.55■□□□□ 0.4
PEPDP12955 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEPDP12955 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.54■□□□□ 0.4
PEPDP12955 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.54■□□□□ 0.4
PEPDP12955 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.54■□□□□ 0.4
PEPDP12955 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PEPDP12955 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 AC026471.5-201ENST00000615068 467 ntBASIC17.54■□□□□ 0.4
PEPDP12955 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.54■□□□□ 0.4
PEPDP12955 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PEPDP12955 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEPDP12955 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PEPDP12955 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
PEPDP12955 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PEPDP12955 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.53■□□□□ 0.4
PEPDP12955 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.53■□□□□ 0.4
PEPDP12955 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.53■□□□□ 0.4
PEPDP12955 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.53■□□□□ 0.4
PEPDP12955 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.53■□□□□ 0.4
PEPDP12955 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.53■□□□□ 0.4
PEPDP12955 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.53■□□□□ 0.4
PEPDP12955 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.53■□□□□ 0.4
PEPDP12955 AC131212.4-201ENST00000623606 975 ntBASIC17.53■□□□□ 0.4
PEPDP12955 AL031985.4-201ENST00000642138 673 ntBASIC17.53■□□□□ 0.4
PEPDP12955 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PEPDP12955 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PEPDP12955 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEPDP12955 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms