Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
BMP4P12644 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BMP4P12644 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.36■□□□□ 0.37
BMP4P12644 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.36■□□□□ 0.37
BMP4P12644 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BMP4P12644 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
BMP4P12644 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.36■□□□□ 0.37
BMP4P12644 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BMP4P12644 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.36■□□□□ 0.37
BMP4P12644 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.36■□□□□ 0.37
BMP4P12644 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BMP4P12644 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.35■□□□□ 0.37
BMP4P12644 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.35■□□□□ 0.37
BMP4P12644 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.35■□□□□ 0.37
BMP4P12644 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
BMP4P12644 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BMP4P12644 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.35■□□□□ 0.37
BMP4P12644 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.35■□□□□ 0.37
BMP4P12644 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.35■□□□□ 0.37
BMP4P12644 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
BMP4P12644 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.35■□□□□ 0.37
BMP4P12644 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BMP4P12644 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
BMP4P12644 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BMP4P12644 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 MIR718-201ENST00000390190 70 ntBASIC17.34■□□□□ 0.37
BMP4P12644 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 AC098590.1-201ENST00000468126 897 ntBASIC17.34■□□□□ 0.37
BMP4P12644 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
BMP4P12644 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.34■□□□□ 0.37
BMP4P12644 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BMP4P12644 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.34■□□□□ 0.37
BMP4P12644 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BMP4P12644 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.34■□□□□ 0.37
BMP4P12644 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BMP4P12644 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BMP4P12644 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BMP4P12644 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.33■□□□□ 0.37
BMP4P12644 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BMP4P12644 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
BMP4P12644 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms